{"id":430,"date":"2019-08-15T22:13:43","date_gmt":"2019-08-15T13:13:43","guid":{"rendered":"https:\/\/best-biostatistics.com\/toukei-er\/entry\/competing-risk-regression-in-r\/"},"modified":"2024-10-07T12:28:00","modified_gmt":"2024-10-07T03:28:00","slug":"competing-risk-regression-in-r","status":"publish","type":"post","link":"https:\/\/best-biostatistics.com\/toukei-er\/entry\/competing-risk-regression-in-r\/","title":{"rendered":"R \u3067\u7af6\u5408\u30ea\u30b9\u30af\u56de\u5e30\u3092\u5b9f\u884c\u3059\u308b\u65b9\u6cd5"},"content":{"rendered":"\n<p>\u7af6\u5408\u30ea\u30b9\u30af\u56de\u5e30\u3068\u306f\u3001\u5171\u5909\u91cf\u8abf\u6574\u3092\u3057\u305f\u7af6\u5408\u30ea\u30b9\u30af\u5206\u6790\u306e\u65b9\u6cd5\u3002<\/p>\n\n\n\n<!--more-->\n\n\n\n<h2 class=\"wp-block-heading\" id=\"\u7af6\u5408\u30ea\u30b9\u30af\u56de\u5e30\u306e\u524d\u306b\u7af6\u5408\u30ea\u30b9\u30af\u3068\u306f\">\u7af6\u5408\u30ea\u30b9\u30af\u56de\u5e30\u306e\u524d\u306b\u7af6\u5408\u30ea\u30b9\u30af\u3068\u306f\uff1f<\/h2>\n\n\n\n<p>\u7af6\u5408\u30ea\u30b9\u30af\u306b\u3064\u3044\u3066\u306f\u3001\u4ee5\u4e0b\u3092\u53c2\u7167\u3002<\/p>\n\n\n<div class=\"swell-block-postLink\">\t\t\t<div class=\"p-blogCard -internal\" data-type=\"type1\" data-onclick=\"clickLink\">\n\t\t\t\t<div class=\"p-blogCard__inner\">\n\t\t\t\t\t<span class=\"p-blogCard__caption\">\u3042\u308f\u305b\u3066\u8aad\u307f\u305f\u3044<\/span>\n\t\t\t\t\t<div class=\"p-blogCard__thumb c-postThumb\"><figure class=\"c-postThumb__figure\"><img decoding=\"async\" src=\"https:\/\/best-biostatistics.com\/toukei-er\/wp-content\/uploads\/2019\/08\/20190814203803-300x300.png\" alt=\"\" class=\"c-postThumb__img u-obf-cover\" width=\"320\" height=\"180\"><\/figure><\/div>\t\t\t\t\t<div class=\"p-blogCard__body\">\n\t\t\t\t\t\t<a class=\"p-blogCard__title\" href=\"https:\/\/best-biostatistics.com\/toukei-er\/entry\/competing-risk-analysis-gray-test-in-r\/\">R \u3067\u7af6\u5408\u30ea\u30b9\u30af\u5206\u6790 Gray \u691c\u5b9a\u3092\u884c\u3046\u65b9\u6cd5<\/a>\n\t\t\t\t\t\t<span class=\"p-blogCard__excerpt\">\u7af6\u5408\u30ea\u30b9\u30af\u3068\u306f\u4f55\u304b\uff1f Gray \u691c\u5b9a\u306e\u5b9f\u884c\u65b9\u6cd5 \u7af6\u5408\u30ea\u30b9\u30af\u3068\u306f\uff1f \u518d\u767a\u304c\u30a8\u30f3\u30c9\u30dd\u30a4\u30f3\u30c8\u3067\u3042\u3063\u305f\u304c\u3001\u518d\u767a\u3059\u308b\u524d\u306b\u6b7b\u4ea1\u3057\u3066\u3057\u307e\u3063\u305f\u306e\u3067\u3001\u89b3\u5bdf\u3067\u304d\u306a\u304b\u3063\u305f\u3002 \u8133\u6897\u585e\u306e\u767a\u73fe\u304c&#8230;<\/span>\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t<\/div>\n\t\t<\/div>\n\n\n<h2 class=\"wp-block-heading\" id=\"\u7af6\u5408\u30ea\u30b9\u30af\u56de\u5e30\u306e\u7a2e\u985e\">\u7af6\u5408\u30ea\u30b9\u30af\u56de\u5e30\u306e\u7a2e\u985e<\/h2>\n\n\n\n<p>\u7af6\u5408\u30ea\u30b9\u30af\u56de\u5e30\u30e2\u30c7\u30eb\u306b\u306f\u56db\u3064\u8003\u3048\u3089\u308c\u308b\u3002<\/p>\n\n\n\n<ol class=\"wp-block-list\">\n<li>\u7d76\u5bfe\u30ea\u30b9\u30af\u56de\u5e30 Absolute Risk Regression<\/li>\n\n\n\n<li>\u30ed\u30b8\u30b9\u30c6\u30a3\u30c3\u30af\u30ea\u30b9\u30af\u56de\u5e30 Logistic Risk Regression<\/li>\n\n\n\n<li>Fine-Gray \u56de\u5e30 Fine and Gray Regression \uff1d\u72ed\u7fa9\u306e\uff08\u3044\u308f\u3086\u308b\uff09\u7af6\u5408\u30ea\u30b9\u30af\u56de\u5e30 Competing Risk Regression<\/li>\n\n\n\n<li>\u539f\u56e0\u5225 Cox \u56de\u5e30 Cause-Specific Cox Regression<\/li>\n<\/ol>\n\n\n\n<p>\u304a\u3059\u3059\u3081\u306f\uff11\u756a\u306e\u7d76\u5bfe\u30ea\u30b9\u30af\u56de\u5e30\u3002<\/p>\n\n\n\n<p>\u5272\u5408\u306e\u56de\u5e30\u5206\u6790\u306a\u306e\u3067\u3001\u7d50\u679c\u306e\u610f\u5473\u3042\u3044\u304c\u308f\u304b\u308a\u3084\u3059\u3044\u3002<\/p>\n\n\n\n<p>Link function\u306f\u30ed\u30b0 <\/p>\n\n\n\n<p>$$ \\log p $$<\/p>\n\n\n\n<p>\uff12\u756a\u76ee\u306e\u30ed\u30b8\u30b9\u30c6\u30a3\u30c3\u30af\u30ea\u30b9\u30af\u56de\u5e30\u306f\u3001\u30aa\u30c3\u30ba\u6bd4\u306e\u56de\u5e30\u5206\u6790\u3002<\/p>\n\n\n\n<p>Link function\u306f\u30ed\u30b8\u30c3\u30c8 <\/p>\n\n\n\n<p>$$ \\log \\frac{p}{1 &#8211; p} $$<\/p>\n\n\n\n<p>\u4e00\u756a\u4e16\u9593\u306b\u77e5\u3089\u308c\u3066\u3044\u308b\u306e\u306f\uff13\u756a\u306e\u3044\u308f\u3086\u308b\u7af6\u5408\u30ea\u30b9\u30af\u56de\u5e30\u306e Fine-Gray \u56de\u5e30\u3060\u304c\u3001\u56de\u5e30\u4fc2\u6570\u306e\u89e3\u91c8\u304c\u96e3\u3057\u3044\u306e\u304c\u6b20\u70b9\u3002<\/p>\n\n\n\n<p>Link function\u306f complementary log-log<\/p>\n\n\n\n<p>$$ \\log{(- \\log{p})} $$<\/p>\n\n\n\n<p>\uff14\u756a\u76ee\u306e\u539f\u56e0\u5225 Cox \u56de\u5e30\u306f\u3001\u30a8\u30f3\u30c9\u30dd\u30a4\u30f3\u30c8\u3054\u3068\u306b Cox \u56de\u5e30\u3092\u884c\u3046\u3082\u306e\u3067\u3001\u3084\u3063\u3066\u3044\u308b\u3053\u3068\u306f\u308f\u304b\u308a\u3084\u3059\u3044\u304c\u3001\u7af6\u5408\u30ea\u30b9\u30af\u3092\u540c\u6642\u306b\u6271\u3044\u305f\u3044\u3068\u3044\u3046\u5e0c\u671b\u3092\u304b\u306a\u3048\u3066\u306f\u3044\u306a\u3044\u3002<\/p>\n\n\n\n<p>\u53c2\u8003\u6587\u732e\u306f\u3053\u3061\u3089\u3002<\/p>\n\n\n\n<p><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC4547456\">https:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC4547456<\/a><\/p>\n\n\n\n\n\n\n\n<div id=\"biost-2710037255\" class=\"biost- biost-entity-placement\"><p style=\"text-align: center;\"><span style=\"font-size: 20px;\"><strong><a href=\"https:\/\/best-biostatistics.com\/kmhl\">\uff1e\uff1e\u3082\u3046\u7d71\u8a08\u3067\u60a9\u3080\u306e\u306f\u7d42\u308f\u308a\u306b\u3057\u307e\u305b\u3093\u304b\uff1f\u00a0<\/a><\/strong><\/span><\/p>\r\n<a href=\"https:\/\/best-biostatistics.com\/kmhl\"><img class=\"aligncenter wp-image-2794 size-full\" src=\"https:\/\/best-biostatistics.com\/wp\/wp-content\/uploads\/2023\/11\/bn_r_03.png\" alt=\"\" width=\"500\" height=\"327\" \/><\/a>\r\n<p style=\"text-align: center;\"><span style=\"color: #ff0000; font-size: 20px;\"><strong><span class=\"marker2\">\u21911\u4e07\u4eba\u4ee5\u4e0a\u306e\u533b\u7642\u5f93\u4e8b\u8005\u304c\u8cfc\u8aad\u4e2d<\/span><\/strong><\/span><\/p><\/div><h2 class=\"wp-block-heading\" id=\"\u7af6\u5408\u30ea\u30b9\u30af\u56de\u5e30\u5206\u6790\u306e\u6e96\u5099\">\u7af6\u5408\u30ea\u30b9\u30af\u56de\u5e30\u5206\u6790\u306e\u6e96\u5099<\/h2>\n\n\n\n<p>R\u3067\u7af6\u5408\u30ea\u30b9\u30af\u56de\u5e30\u5206\u6790\u3092\u884c\u3046\u306b\u306f\u3044\u304f\u3064\u304b\u306e\u30d1\u30c3\u30b1\u30fc\u30b8\u3092\u30a4\u30f3\u30b9\u30c8\u30fc\u30eb\u3059\u308b\u5fc5\u8981\u304c\u3042\u308b\u3002<\/p>\n\n\n\n<p>\u4ee5\u4e0b\u306e\u30b9\u30af\u30ea\u30d7\u30c8\u3092\u4f5c\u52d5\u3055\u305b\u308b\u306b\u306f\u4ee5\u4e0b\u306e\u30d1\u30c3\u30b1\u30fc\u30b8\u3092\u3042\u3089\u304b\u3058\u3081\u30a4\u30f3\u30b9\u30c8\u30fc\u30eb\u3057\u3066\u304a\u304f\u3002<\/p>\n\n\n\n<ul class=\"wp-block-list\">\n<li>riskRegression ( ARR, LRR, CSC )<\/li>\n\n\n\n<li>cmprsk ( crr )<\/li>\n\n\n\n<li>prodlim ( Hist )<\/li>\n\n\n\n<li>timereg ( comp.risk )<\/li>\n<\/ul>\n\n\n\n<p>( ) \u5185\u306f\u3001\u4ee5\u4e0b\u3067\u767b\u5834\u3059\u308b\u3001\u5404\u30d1\u30c3\u30b1\u30fc\u30b8\u306b\u542b\u307e\u308c\u308b\u95a2\u6570\u540d\u3002<\/p>\n\n\n\n<p>\u307e\u305f\u3001Melanoma \u3068\u3044\u3046\u30c7\u30fc\u30bf\u30bb\u30c3\u30c8\u306f\u3001riskRegression \u30d1\u30c3\u30b1\u30fc\u30b8\u306b\u542b\u307e\u308c\u308b\u30b5\u30f3\u30d7\u30eb\u30c7\u30fc\u30bf\u30bb\u30c3\u30c8\u3002<\/p>\n\n\n\n<p>\u30a4\u30f3\u30b9\u30c8\u30fc\u30eb\u65b9\u6cd5\u306f\u4ee5\u4e0b\u306e\u3068\u304a\u308a<\/p>\n\n\n\n<pre class=\"wp-block-code\"><code><span class=\"synIdentifier\">install.packages<\/span><span class=\"synSpecial\">(<\/span><span class=\"synConstant\">\"riskRegression\"<\/span><span class=\"synSpecial\">)<\/span>\n<\/code><\/pre>\n\n\n\n<p>\u3068 R \u30b3\u30f3\u30bd\u30fc\u30eb\u306b\u66f8\u3044\u3066\u30a8\u30f3\u30bf\u30fc\u3057\u3001Japan \u306e Mirror Server \u3092\u9078\u3093\u3067 OK \u3092\u30af\u30ea\u30c3\u30af\u3002<\/p>\n\n\n\n<p>\u30a4\u30f3\u30b9\u30c8\u30fc\u30eb\u304c\u6e08\u3093\u3060\u3089\u3001library()\u3067\u547c\u3073\u51fa\u3057\u3066\u304a\u304f\u3002\u30c7\u30d5\u30a9\u30eb\u30c8\u3067\u30a4\u30f3\u30b9\u30c8\u30fc\u30eb\u3055\u308c\u3066\u3044\u308bsurvival\u3082\u547c\u3073\u51fa\u3057\u3066\u304a\u304f\u3002<\/p>\n\n\n\n<pre class=\"wp-block-code\"><code><span class=\"synPreProc\">library<\/span><span class=\"synSpecial\">(<\/span>riskRegression<span class=\"synSpecial\">)<\/span>\n<span class=\"synPreProc\">library<\/span><span class=\"synSpecial\">(<\/span>cmprsk<span class=\"synSpecial\">)<\/span>\n<span class=\"synPreProc\">library<\/span><span class=\"synSpecial\">(<\/span>prodlim<span class=\"synSpecial\">)<\/span>\n<span class=\"synPreProc\">library<\/span><span class=\"synSpecial\">(<\/span>timereg<span class=\"synSpecial\">)<\/span>\n<span class=\"synPreProc\">library<\/span><span class=\"synSpecial\">(<\/span>survival<span class=\"synSpecial\">)<\/span>\n<\/code><\/pre>\n\n\n\n<h2 class=\"wp-block-heading\" id=\"\u7af6\u5408\u30ea\u30b9\u30af\u56de\u5e30-1-\u7d76\u5bfe\u30ea\u30b9\u30af\u56de\u5e30\">\u7af6\u5408\u30ea\u30b9\u30af\u56de\u5e30 1\uff1a \u7d76\u5bfe\u30ea\u30b9\u30af\u56de\u5e30<\/h2>\n\n\n\n<p>\u6d78\u6f64\u306e\u30ea\u30b9\u30af\u3092\u63a8\u5b9a\u3059\u308b\u305f\u3081\u3001\u5e74\u9f62\u3092\u5171\u5909\u91cf\u3068\u3057\u3066\u30e2\u30c7\u30eb\u3092\u4f5c\u6210\u3057\u89e3\u6790\u3059\u308b\u3002<\/p>\n\n\n\n<p>ARR()\u306e\u4e2d\u306bEvent History\u5909\u6570\u3092\u4f5c\u308bHist()\u3092\u4f7f\u3046\u3002<\/p>\n\n\n\n<p>status==1\uff08\u30e1\u30e9\u30ce\u30fc\u30de\u306b\u3088\u308b\u6b7b\u4ea1\u3002\u691c\u8a0e\u3057\u305f\u3044\u30a8\u30f3\u30c9\u30dd\u30a4\u30f3\u30c8\uff09\u306e\u30ea\u30b9\u30af\u3092\u8a08\u7b97\u3057\u3066\u3082\u3089\u3046\u305f\u3081\u306bcause=1\u3092\u3064\u3051\u308b\u3002<\/p>\n\n\n\n<pre class=\"wp-block-code\"><code>ARR1 <span class=\"synStatement\">&lt;-<\/span> <span class=\"synIdentifier\">ARR<\/span><span class=\"synSpecial\">(<\/span><span class=\"synIdentifier\">Hist<\/span><span class=\"synSpecial\">(<\/span>time<span class=\"synSpecial\">,<\/span>status<span class=\"synSpecial\">)<\/span><span class=\"synStatement\">~<\/span>invasion<span class=\"synStatement\">+<\/span>age<span class=\"synSpecial\">,<\/span>\ndata<span class=\"synStatement\">=<\/span>Melanoma<span class=\"synSpecial\">,<\/span>cause<span class=\"synStatement\">=<\/span><span class=\"synConstant\">1<\/span><span class=\"synSpecial\">)<\/span>\n<span class=\"synIdentifier\">summary<\/span><span class=\"synSpecial\">(<\/span>ARR1<span class=\"synSpecial\">)<\/span>\n<\/code><\/pre>\n\n\n\n<p>riskRegression()\u3092\u4f7f\u3046\u5834\u5408link=&#8221;relative&#8221;\u3068\u3059\u308b\u3002<\/p>\n\n\n\n<p>\u7d50\u679c\u306f\u540c\u3058\u306b\u306a\u308b\u3002<\/p>\n\n\n\n<pre class=\"wp-block-code\"><code>rR1 <span class=\"synStatement\">&lt;-<\/span> <span class=\"synIdentifier\">riskRegression<\/span><span class=\"synSpecial\">(<\/span><span class=\"synIdentifier\">Hist<\/span><span class=\"synSpecial\">(<\/span>time<span class=\"synSpecial\">,<\/span>status<span class=\"synSpecial\">)<\/span><span class=\"synStatement\">~<\/span>invasion<span class=\"synStatement\">+<\/span>age<span class=\"synSpecial\">,<\/span>\ndata<span class=\"synStatement\">=<\/span>Melanoma<span class=\"synSpecial\">,<\/span>cause<span class=\"synStatement\">=<\/span><span class=\"synConstant\">1<\/span><span class=\"synSpecial\">,<\/span>link<span class=\"synStatement\">=<\/span><span class=\"synConstant\">\"relative\"<\/span><span class=\"synSpecial\">)<\/span>\n<span class=\"synIdentifier\">summary<\/span><span class=\"synSpecial\">(<\/span>rR1<span class=\"synSpecial\">)<\/span>\n<\/code><\/pre>\n\n\n\n<pre class=\"wp-block-code\"><code><span class=\"synStatement\">&gt;<\/span> <span class=\"synIdentifier\">summary<\/span><span class=\"synSpecial\">(<\/span>ARR1<span class=\"synSpecial\">)<\/span>\nriskRegression<span class=\"synSpecial\">:<\/span> Competing risks regression model\nIPCW estimation. The weights are based on\nthe Kaplan<span class=\"synStatement\">-<\/span>Meier estimate <span class=\"synStatement\">for<\/span> the censoring distribution.\nLink <span class=\"synType\">function<\/span><span class=\"synSpecial\">:<\/span> <span class=\"synConstant\">'relative'<\/span> yielding absolute risk ratios<span class=\"synSpecial\">,<\/span> see <span class=\"synIdentifier\">help<\/span><span class=\"synSpecial\">(<\/span>riskRegression<span class=\"synSpecial\">)<\/span>.\n\uff08\u4e2d\u7565\uff09\nTime constant regression coefficients<span class=\"synSpecial\">:<\/span>\nFactor    Coef <span class=\"synIdentifier\">exp<\/span><span class=\"synSpecial\">(<\/span>Coef<span class=\"synSpecial\">)<\/span> StandardError       z         CI_95    Pvalue\ninvasionlevel.1   <span class=\"synConstant\">0.833<\/span>     <span class=\"synConstant\">2.301<\/span>         <span class=\"synConstant\">0.319<\/span>   <span class=\"synConstant\">2.612<\/span> <span class=\"synSpecial\">&#91;<\/span><span class=\"synConstant\">1.231<\/span><span class=\"synSpecial\">;<\/span><span class=\"synConstant\">4.300<\/span><span class=\"synSpecial\">]<\/span> <span class=\"synConstant\">0.0089994<\/span>\ninvasionlevel.2   <span class=\"synConstant\">1.313<\/span>     <span class=\"synConstant\">3.717<\/span>         <span class=\"synConstant\">0.338<\/span>   <span class=\"synConstant\">3.880<\/span> <span class=\"synSpecial\">&#91;<\/span><span class=\"synConstant\">1.915<\/span><span class=\"synSpecial\">;<\/span><span class=\"synConstant\">7.213<\/span><span class=\"synSpecial\">]<\/span> <span class=\"synConstant\">0.0001044<\/span>\nage <span class=\"synConstant\">0.00440<\/span>   <span class=\"synConstant\">1.00441<\/span>       <span class=\"synConstant\">0.00795<\/span> <span class=\"synConstant\">0.55335<\/span> <span class=\"synSpecial\">&#91;<\/span><span class=\"synConstant\">0.989<\/span><span class=\"synSpecial\">;<\/span><span class=\"synConstant\">1.020<\/span><span class=\"synSpecial\">]<\/span> <span class=\"synConstant\">0.5800251<\/span>\nNote<span class=\"synSpecial\">:<\/span> The values <span class=\"synIdentifier\">exp<\/span><span class=\"synSpecial\">(<\/span>Coef<span class=\"synSpecial\">)<\/span> are absolute risk ratios\n<\/code><\/pre>\n\n\n\n<p>\u7d50\u679c\u306f\u4e0a\u8a18\u306e\u901a\u308a\u3067\u3001\u6d78\u6f64\u30ec\u30d9\u30eb\u30bc\u30ed\u306b\u6bd4\u3079\uff11\u306f2.3\u500d\u306e\u30e1\u30e9\u30ce\u30fc\u30de\u6b7b\u4ea1\u306e\u30ea\u30b9\u30af\u30012\u306f3.7\u500d\u306e\u30ea\u30b9\u30af\u3068\u8a00\u3048\u308b\u3002<\/p>\n\n\n\n<h2 class=\"wp-block-heading\" id=\"\u7af6\u5408\u30ea\u30b9\u30af\u56de\u5e30-2-\u30ed\u30b8\u30b9\u30c6\u30a3\u30c3\u30af\u30ea\u30b9\u30af\u56de\u5e30\">\u7af6\u5408\u30ea\u30b9\u30af\u56de\u5e30 2\uff1a \u30ed\u30b8\u30b9\u30c6\u30a3\u30c3\u30af\u30ea\u30b9\u30af\u56de\u5e30<\/h2>\n\n\n\n<p>\u30ed\u30b8\u30b9\u30c6\u30a3\u30c3\u30af\u30ea\u30b9\u30af\u56de\u5e30\u306fLRR()\u3092\u4f7f\u3046\u3002<\/p>\n\n\n\n<pre class=\"wp-block-code\"><code>LRR1 <span class=\"synStatement\">&lt;-<\/span> <span class=\"synIdentifier\">LRR<\/span><span class=\"synSpecial\">(<\/span><span class=\"synIdentifier\">Hist<\/span><span class=\"synSpecial\">(<\/span>time<span class=\"synSpecial\">,<\/span>status<span class=\"synSpecial\">)<\/span><span class=\"synStatement\">~<\/span>invasion<span class=\"synStatement\">+<\/span>age<span class=\"synSpecial\">,<\/span>\ndata<span class=\"synStatement\">=<\/span>Melanoma<span class=\"synSpecial\">,<\/span>cause<span class=\"synStatement\">=<\/span><span class=\"synConstant\">1<\/span><span class=\"synSpecial\">)<\/span>\n<span class=\"synIdentifier\">summary<\/span><span class=\"synSpecial\">(<\/span>LRR1<span class=\"synSpecial\">)<\/span>\n<\/code><\/pre>\n\n\n\n<p>riskRegression()\u3092\u4f7f\u3046\u5834\u5408\u306flink=&#8221;logistic&#8221;\u3068\u3059\u308b\u3002\u4e0a\u8a18\u3068\u540c\u3058\u7d50\u679c\u306b\u306a\u308b\u3002<\/p>\n\n\n\n<pre class=\"wp-block-code\"><code>rR.L1 <span class=\"synStatement\">&lt;-<\/span> <span class=\"synIdentifier\">riskRegression<\/span><span class=\"synSpecial\">(<\/span><span class=\"synIdentifier\">Hist<\/span><span class=\"synSpecial\">(<\/span>time<span class=\"synSpecial\">,<\/span>status<span class=\"synSpecial\">)<\/span><span class=\"synStatement\">~<\/span>invasion<span class=\"synStatement\">+<\/span>age<span class=\"synSpecial\">,<\/span>\ndata<span class=\"synStatement\">=<\/span>Melanoma<span class=\"synSpecial\">,<\/span>cause<span class=\"synStatement\">=<\/span><span class=\"synConstant\">1<\/span><span class=\"synSpecial\">,<\/span>link<span class=\"synStatement\">=<\/span><span class=\"synConstant\">\"logistic\"<\/span><span class=\"synSpecial\">)<\/span>\n<span class=\"synIdentifier\">summary<\/span><span class=\"synSpecial\">(<\/span>rR.L1<span class=\"synSpecial\">)<\/span>\n<\/code><\/pre>\n\n\n\n<pre class=\"wp-block-code\"><code><span class=\"synStatement\">&gt;<\/span> <span class=\"synIdentifier\">summary<\/span><span class=\"synSpecial\">(<\/span>LRR1<span class=\"synSpecial\">)<\/span>\nriskRegression<span class=\"synSpecial\">:<\/span> Competing risks regression model\nIPCW estimation. The weights are based on\nthe Kaplan<span class=\"synStatement\">-<\/span>Meier estimate <span class=\"synStatement\">for<\/span> the censoring distribution.\nLink <span class=\"synType\">function<\/span><span class=\"synSpecial\">:<\/span> <span class=\"synConstant\">'logistic'<\/span> yielding odds ratios<span class=\"synSpecial\">,<\/span> see <span class=\"synIdentifier\">help<\/span><span class=\"synSpecial\">(<\/span>riskRegression<span class=\"synSpecial\">)<\/span>.\n\uff08\u4e2d\u7565\uff09\nTime constant regression coefficients<span class=\"synSpecial\">:<\/span>\nFactor    Coef <span class=\"synIdentifier\">exp<\/span><span class=\"synSpecial\">(<\/span>Coef<span class=\"synSpecial\">)<\/span> StandardError       z          CI_95    Pvalue\ninvasionlevel.1   <span class=\"synConstant\">1.058<\/span>     <span class=\"synConstant\">2.881<\/span>         <span class=\"synConstant\">0.392<\/span>   <span class=\"synConstant\">2.701<\/span> <span class=\"synSpecial\">&#91;<\/span><span class=\"synConstant\">1.337<\/span><span class=\"synSpecial\">;<\/span> <span class=\"synConstant\">6.210<\/span><span class=\"synSpecial\">]<\/span> <span class=\"synConstant\">0.0069102<\/span>\ninvasionlevel.2   <span class=\"synConstant\">1.818<\/span>     <span class=\"synConstant\">6.160<\/span>         <span class=\"synConstant\">0.477<\/span>   <span class=\"synConstant\">3.808<\/span> <span class=\"synSpecial\">&#91;<\/span><span class=\"synConstant\">2.416<\/span><span class=\"synSpecial\">;<\/span><span class=\"synConstant\">15.701<\/span><span class=\"synSpecial\">]<\/span> <span class=\"synConstant\">0.0001401<\/span>\nage <span class=\"synConstant\">0.00384<\/span>   <span class=\"synConstant\">1.00385<\/span>       <span class=\"synConstant\">0.01165<\/span> <span class=\"synConstant\">0.32964<\/span> <span class=\"synSpecial\">&#91;<\/span><span class=\"synConstant\">0.981<\/span><span class=\"synSpecial\">;<\/span> <span class=\"synConstant\">1.027<\/span><span class=\"synSpecial\">]<\/span> <span class=\"synConstant\">0.7416742<\/span>\nNote<span class=\"synSpecial\">:<\/span> The values <span class=\"synIdentifier\">exp<\/span><span class=\"synSpecial\">(<\/span>Coef<span class=\"synSpecial\">)<\/span> are odds ratios\n<\/code><\/pre>\n\n\n\n<p>\u30ed\u30b8\u30b9\u30c6\u30a3\u30c3\u30af\u30ea\u30b9\u30af\u56de\u5e30\u306e\u7d50\u679c\u3068\u3057\u3066\u306e\u30aa\u30c3\u30ba\u6bd4\u306f\u3001\u7d76\u5bfe\u30ea\u30b9\u30af\u56de\u5e30\u306e\u7d50\u679c\u306b\u6bd4\u3079\u308b\u3068\u5927\u304d\u304f\u306a\u308a\u3001\u6d78\u6f64\u30ec\u30d9\u30eb\uff11\u306f\u30bc\u30ed\u306b\u6bd4\u3079\u30aa\u30c3\u30ba\u6bd42.9\u30012\u306f\u30aa\u30c3\u30ba\u6bd46.2\u3068\u306a\u308b\u3002<\/p>\n\n\n\n<h2 class=\"wp-block-heading\" id=\"\u7af6\u5408\u30ea\u30b9\u30af\u56de\u5e30-3-Fine-Gray-\u56de\u5e30\">\u7af6\u5408\u30ea\u30b9\u30af\u56de\u5e30 3\uff1a Fine-Gray \u56de\u5e30<\/h2>\n\n\n\n<p>Fine-Gray\u56de\u5e30\u306fcomp.risk()\u3092\u4f7f\u3046\u3002Time to Event\u30c7\u30fc\u30bf\u306b\u5909\u63db\u3059\u308bEvent()\u3092\u4f7f\u3046\u3002<\/p>\n\n\n\n<pre class=\"wp-block-code\"><code>cr1 <span class=\"synStatement\">&lt;-<\/span> <span class=\"synIdentifier\">comp.risk<\/span><span class=\"synSpecial\">(<\/span><span class=\"synIdentifier\">Event<\/span><span class=\"synSpecial\">(<\/span>time<span class=\"synSpecial\">,<\/span>status<span class=\"synSpecial\">)<\/span><span class=\"synStatement\">~<\/span><span class=\"synIdentifier\">const<\/span><span class=\"synSpecial\">(<\/span>invasion<span class=\"synSpecial\">)<\/span><span class=\"synStatement\">+<\/span><span class=\"synIdentifier\">const<\/span><span class=\"synSpecial\">(<\/span>age<span class=\"synSpecial\">),<\/span>\ndata<span class=\"synStatement\">=<\/span>Melanoma<span class=\"synSpecial\">,<\/span>cause<span class=\"synStatement\">=<\/span><span class=\"synConstant\">1<\/span><span class=\"synSpecial\">,<\/span>model<span class=\"synStatement\">=<\/span><span class=\"synConstant\">\"prop\"<\/span><span class=\"synSpecial\">)<\/span>\n<span class=\"synIdentifier\">summary<\/span><span class=\"synSpecial\">(<\/span>cr1<span class=\"synSpecial\">)<\/span>\n<\/code><\/pre>\n\n\n\n<p>riskRegression()\u3067\u3082link=&#8221;prop&#8221;\u3068\u3059\u308b\u3068\u540c\u3058\u8a08\u7b97\u304c\u3067\u304d\u308b\u3002<\/p>\n\n\n\n<pre class=\"wp-block-code\"><code>rR.FG1 <span class=\"synStatement\">&lt;-<\/span> <span class=\"synIdentifier\">riskRegression<\/span><span class=\"synSpecial\">(<\/span><span class=\"synIdentifier\">Hist<\/span><span class=\"synSpecial\">(<\/span>time<span class=\"synSpecial\">,<\/span>status<span class=\"synSpecial\">)<\/span><span class=\"synStatement\">~<\/span>invasion<span class=\"synStatement\">+<\/span>age<span class=\"synSpecial\">,<\/span>\ndata<span class=\"synStatement\">=<\/span>Melanoma<span class=\"synSpecial\">,<\/span>cause<span class=\"synStatement\">=<\/span><span class=\"synConstant\">1<\/span><span class=\"synSpecial\">,<\/span>link<span class=\"synStatement\">=<\/span><span class=\"synConstant\">\"prop\"<\/span><span class=\"synSpecial\">)<\/span>\n<span class=\"synIdentifier\">summary<\/span><span class=\"synSpecial\">(<\/span>rR.FG1<span class=\"synSpecial\">)<\/span>\n<\/code><\/pre>\n\n\n\n<pre class=\"wp-block-code\"><code><span class=\"synStatement\">&gt;<\/span> <span class=\"synIdentifier\">summary<\/span><span class=\"synSpecial\">(<\/span>cr1<span class=\"synSpecial\">)<\/span>\nCompeting risks Model\nNo test <span class=\"synStatement\">for<\/span> non<span class=\"synStatement\">-<\/span>parametric terms\nParametric terms <span class=\"synSpecial\">:<\/span>\nCoef.      SE Robust SE     z    P<span class=\"synStatement\">-<\/span>val lower2.5%\n<span class=\"synIdentifier\">const<\/span><span class=\"synSpecial\">(<\/span>invasion<span class=\"synSpecial\">)<\/span>level.1 <span class=\"synConstant\">0.93900<\/span> <span class=\"synConstant\">0.35300<\/span>   <span class=\"synConstant\">0.35300<\/span> <span class=\"synConstant\">2.660<\/span> <span class=\"synConstant\">0.007740<\/span>    <span class=\"synConstant\">0.2470<\/span>\n<span class=\"synIdentifier\">const<\/span><span class=\"synSpecial\">(<\/span>invasion<span class=\"synSpecial\">)<\/span>level.2 <span class=\"synConstant\">1.55000<\/span> <span class=\"synConstant\">0.40100<\/span>   <span class=\"synConstant\">0.40100<\/span> <span class=\"synConstant\">3.870<\/span> <span class=\"synConstant\">0.000108<\/span>    <span class=\"synConstant\">0.7640<\/span>\n<span class=\"synIdentifier\">const<\/span><span class=\"synSpecial\">(<\/span>age<span class=\"synSpecial\">)<\/span>             <span class=\"synConstant\">0.00414<\/span> <span class=\"synConstant\">0.00984<\/span>   <span class=\"synConstant\">0.00984<\/span> <span class=\"synConstant\">0.421<\/span> <span class=\"synConstant\">0.674000<\/span>   <span class=\"synStatement\">-<\/span><span class=\"synConstant\">0.0151<\/span>\nupper97.5%\n<span class=\"synIdentifier\">const<\/span><span class=\"synSpecial\">(<\/span>invasion<span class=\"synSpecial\">)<\/span>level.1     <span class=\"synConstant\">1.6300<\/span>\n<span class=\"synIdentifier\">const<\/span><span class=\"synSpecial\">(<\/span>invasion<span class=\"synSpecial\">)<\/span>level.2     <span class=\"synConstant\">2.3400<\/span>\n<span class=\"synIdentifier\">const<\/span><span class=\"synSpecial\">(<\/span>age<span class=\"synSpecial\">)<\/span>                 <span class=\"synConstant\">0.0234<\/span>\n<span class=\"synStatement\">&gt;<\/span> <span class=\"synIdentifier\">summary<\/span><span class=\"synSpecial\">(<\/span>rR.FG1<span class=\"synSpecial\">)<\/span>\nriskRegression<span class=\"synSpecial\">:<\/span> Competing risks regression model\nIPCW estimation. The weights are based on\nthe Kaplan<span class=\"synStatement\">-<\/span>Meier estimate <span class=\"synStatement\">for<\/span> the censoring distribution.\nLink <span class=\"synType\">function<\/span><span class=\"synSpecial\">:<\/span> <span class=\"synConstant\">'proportional'<\/span> yielding sub<span class=\"synStatement\">-<\/span>hazard <span class=\"synIdentifier\">ratios <\/span><span class=\"synSpecial\">(<\/span>Fine <span class=\"synStatement\">&amp;<\/span> Gray <span class=\"synConstant\">1999<\/span><span class=\"synSpecial\">),<\/span> see <span class=\"synIdentifier\">help<\/span><span class=\"synSpecial\">(<\/span>riskRegression<span class=\"synSpecial\">)<\/span>.\n\uff08\u4e2d\u7565\uff09\nTime constant regression coefficients<span class=\"synSpecial\">:<\/span>\nFactor    Coef <span class=\"synIdentifier\">exp<\/span><span class=\"synSpecial\">(<\/span>Coef<span class=\"synSpecial\">)<\/span> StandardError       z          CI_95   Pvalue\ninvasionlevel.1   <span class=\"synConstant\">0.939<\/span>     <span class=\"synConstant\">2.558<\/span>         <span class=\"synConstant\">0.353<\/span>   <span class=\"synConstant\">2.663<\/span> <span class=\"synSpecial\">&#91;<\/span><span class=\"synConstant\">1.282<\/span><span class=\"synSpecial\">;<\/span> <span class=\"synConstant\">5.106<\/span><span class=\"synSpecial\">]<\/span> <span class=\"synConstant\">0.007736<\/span>\ninvasionlevel.2   <span class=\"synConstant\">1.551<\/span>     <span class=\"synConstant\">4.716<\/span>         <span class=\"synConstant\">0.401<\/span>   <span class=\"synConstant\">3.872<\/span> <span class=\"synSpecial\">&#91;<\/span><span class=\"synConstant\">2.151<\/span><span class=\"synSpecial\">;<\/span><span class=\"synConstant\">10.339<\/span><span class=\"synSpecial\">]<\/span> <span class=\"synConstant\">0.000108<\/span>\nage <span class=\"synConstant\">0.00414<\/span>   <span class=\"synConstant\">1.00415<\/span>       <span class=\"synConstant\">0.00984<\/span> <span class=\"synConstant\">0.42116<\/span> <span class=\"synSpecial\">&#91;<\/span><span class=\"synConstant\">0.985<\/span><span class=\"synSpecial\">;<\/span> <span class=\"synConstant\">1.024<\/span><span class=\"synSpecial\">]<\/span> <span class=\"synConstant\">0.673635<\/span>\nNote<span class=\"synSpecial\">:<\/span> The values <span class=\"synIdentifier\">exp<\/span><span class=\"synSpecial\">(<\/span>Coef<span class=\"synSpecial\">)<\/span> are sub<span class=\"synStatement\">-<\/span>hazard <span class=\"synIdentifier\">ratios <\/span><span class=\"synSpecial\">(<\/span>Fine <span class=\"synStatement\">&amp;<\/span> Gray <span class=\"synConstant\">1999<\/span><span class=\"synSpecial\">)<\/span>\n<\/code><\/pre>\n\n\n\n<p>\u7d50\u679c\u306f\u3001\u6d78\u6f64\u30ec\u30d9\u30eb\u30bc\u30ed\u306b\u6bd4\u30791\u306e\u5834\u5408\u306f2.6\u500d\u306e\u30ea\u30b9\u30af\u30012\u306e\u5834\u5408\u306f4.7\u500d\u306e\u30ea\u30b9\u30af\u3068\u306a\u308b\u3002<\/p>\n\n\n\n<h3 class=\"wp-block-heading\" id=\"\u89e3\u8aac\u52d5\u753bEZR\u3067-Fine-Gray-\u56de\u5e30\">\u89e3\u8aac\u52d5\u753b\uff1aEZR\u3067 Fine-Gray \u56de\u5e30<\/h3>\n\n\n\n<p><iframe width=\"560\" height=\"315\" src=\"https:\/\/www.youtube.com\/embed\/F30PxjJQPlE?feature=oembed\" frameborder=\"0\" allow=\"accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share\" referrerpolicy=\"strict-origin-when-cross-origin\" allowfullscreen=\"allowfullscreen\" title=\"EZR\u3067\u7af6\u5408\u30ea\u30b9\u30af\u306eFine-Gray\u56de\u5e30\u3092\u884c\u3046\u65b9\u6cd5\"><\/iframe><cite class=\"hatena-citation\"><a href=\"https:\/\/youtu.be\/F30PxjJQPlE\">youtu.be<\/a><\/cite><\/p>\n\n\n\n<h2 class=\"wp-block-heading\" id=\"\u7af6\u5408\u30ea\u30b9\u30af\u56de\u5e30-4-\u539f\u56e0\u5225-Cox-\u56de\u5e30\">\u7af6\u5408\u30ea\u30b9\u30af\u56de\u5e30 4\uff1a \u539f\u56e0\u5225 Cox \u56de\u5e30<\/h2>\n\n\n\n<p>\u539f\u56e0\u5225 Cox \u56de\u5e30\u306f CSC() \u3092\u4f7f\u3046\u3002<\/p>\n\n\n\n<pre class=\"wp-block-code\"><code>CSC1 <span class=\"synStatement\">&lt;-<\/span> <span class=\"synIdentifier\">CSC<\/span><span class=\"synSpecial\">(<\/span><span class=\"synIdentifier\">Hist<\/span><span class=\"synSpecial\">(<\/span>time<span class=\"synSpecial\">,<\/span>status<span class=\"synSpecial\">)<\/span><span class=\"synStatement\">~<\/span>invasion<span class=\"synStatement\">+<\/span>age<span class=\"synSpecial\">,<\/span>\ndata<span class=\"synStatement\">=<\/span>Melanoma<span class=\"synSpecial\">)<\/span>\n<span class=\"synIdentifier\">summary<\/span><span class=\"synSpecial\">(<\/span>CSC1<span class=\"synSpecial\">)<\/span>\n<\/code><\/pre>\n\n\n\n<p>\u3044\u307e\u307e\u3067\u3068\u9055\u3046\u3068\u3053\u308d\u306f\u3001\u7af6\u5408\u30ea\u30b9\u30af\u306e\u30cf\u30b6\u30fc\u30c9\u6bd4\u3082\u540c\u6642\u306b\u8a08\u7b97\u3057\u3066\u304f\u308c\u308b\u3068\u3053\u308d\u3002<\/p>\n\n\n\n<p>\u30a4\u30d9\u30f3\u30c8 cause=1\uff08\u30e1\u30e9\u30ce\u30fc\u30de\u306b\u3088\u308b\u6b7b\u4ea1\uff09\u306e\u30ea\u30b9\u30af\u306f\u6d78\u6f64\u30ec\u30d9\u30eb\u30bc\u30ed\u306b\u6bd4\u30791\u306f2.8\u500d\u30012\u306f3.9\u500d\u3060\u3063\u305f\u3002<\/p>\n\n\n\n<p>\u3053\u308c\u306f\u3001\u7d76\u5bfe\u30ea\u30b9\u30af\u56de\u5e30\u306b\u8fd1\u3044\u3002<\/p>\n\n\n\n<p>\u7af6\u5408\u30ea\u30b9\u30af\uff08cause=2, \u30e1\u30e9\u30ce\u30fc\u30de\u4ee5\u5916\u306b\u3088\u308b\u6b7b\u4ea1\uff09\u306f\u3001\u5e74\u9f62\u304c\u7d71\u8a08\u5b66\u7684\u6709\u610f\u306a\u30ea\u30b9\u30af\u3067\u30011\u6b73\u5e74\u3092\u53d6\u308b\u3054\u3068\u306b1.1\u500d\u306e\u30ea\u30b9\u30af\u3067\u3042\u3063\u305f\u3002<\/p>\n\n\n\n<p>\u5e74\u3092\u53d6\u308c\u3070\u4eba\u306f\u4ea1\u304f\u306a\u308b\u3002<\/p>\n\n\n\n<p>\u5f53\u7136\u3068\u8a00\u3048\u3070\u5f53\u7136\u3002<\/p>\n\n\n\n<p>\u30e1\u30e9\u30ce\u30fc\u30de\u306e\u6d78\u6f64\u30ec\u30d9\u30eb\u306f\u7121\u95a2\u4fc2\u3060\u3002<\/p>\n\n\n\n<pre class=\"wp-block-code\"><code><span class=\"synStatement\">&gt;<\/span> <span class=\"synIdentifier\">print<\/span><span class=\"synSpecial\">(<\/span>CSC1<span class=\"synSpecial\">)<\/span>\n<span class=\"synIdentifier\">CSC<\/span><span class=\"synSpecial\">(<\/span>formula <span class=\"synStatement\">=<\/span> <span class=\"synIdentifier\">Hist<\/span><span class=\"synSpecial\">(<\/span>time<span class=\"synSpecial\">,<\/span> status<span class=\"synSpecial\">)<\/span> <span class=\"synStatement\">~<\/span> invasion <span class=\"synStatement\">+<\/span> age<span class=\"synSpecial\">,<\/span> data <span class=\"synStatement\">=<\/span> Melanoma<span class=\"synSpecial\">)<\/span>\nRight<span class=\"synStatement\">-<\/span>censored response of a competing.risks model\nNo.Observations<span class=\"synSpecial\">:<\/span> <span class=\"synConstant\">205<\/span>\nPattern<span class=\"synSpecial\">:<\/span>\nCause     event right.censored\n<span class=\"synConstant\">1<\/span>          <span class=\"synConstant\">57<\/span>              <span class=\"synConstant\">0<\/span>\n<span class=\"synConstant\">2<\/span>          <span class=\"synConstant\">14<\/span>              <span class=\"synConstant\">0<\/span>\nunknown     <span class=\"synConstant\">0<\/span>            <span class=\"synConstant\">134<\/span>\n<span class=\"synStatement\">----------&gt;<\/span> Cause<span class=\"synSpecial\">:<\/span>  <span class=\"synConstant\">1<\/span>\nCall<span class=\"synSpecial\">:<\/span>\nsurvival<span class=\"synSpecial\">::<\/span><span class=\"synIdentifier\">coxph<\/span><span class=\"synSpecial\">(<\/span>formula <span class=\"synStatement\">=<\/span> survival<span class=\"synSpecial\">::<\/span><span class=\"synIdentifier\">Surv<\/span><span class=\"synSpecial\">(<\/span>time<span class=\"synSpecial\">,<\/span> status<span class=\"synSpecial\">)<\/span> <span class=\"synStatement\">~<\/span> invasion <span class=\"synStatement\">+<\/span>\nage<span class=\"synSpecial\">,<\/span> x <span class=\"synStatement\">=<\/span> <span class=\"synConstant\">TRUE<\/span><span class=\"synSpecial\">,<\/span> y <span class=\"synStatement\">=<\/span> <span class=\"synConstant\">TRUE<\/span><span class=\"synSpecial\">)<\/span>\nn<span class=\"synStatement\">=<\/span> <span class=\"synConstant\">205<\/span><span class=\"synSpecial\">,<\/span> number of events<span class=\"synStatement\">=<\/span> <span class=\"synConstant\">57<\/span>\ncoef <span class=\"synIdentifier\">exp<\/span><span class=\"synSpecial\">(<\/span>coef<span class=\"synSpecial\">)<\/span> <span class=\"synIdentifier\">se<\/span><span class=\"synSpecial\">(<\/span>coef<span class=\"synSpecial\">)<\/span>     z <span class=\"synIdentifier\">Pr<\/span><span class=\"synSpecial\">(<\/span><span class=\"synStatement\">&gt;|<\/span>z<span class=\"synStatement\">|<\/span><span class=\"synSpecial\">)<\/span>\ninvasionlevel.1 <span class=\"synConstant\">1.016821<\/span>  <span class=\"synConstant\">2.764392<\/span> <span class=\"synConstant\">0.328422<\/span> <span class=\"synConstant\">3.096<\/span> <span class=\"synConstant\">0.001961<\/span> <span class=\"synStatement\">**<\/span>\ninvasionlevel.2 <span class=\"synConstant\">1.351844<\/span>  <span class=\"synConstant\">3.864544<\/span> <span class=\"synConstant\">0.381768<\/span> <span class=\"synConstant\">3.541<\/span> <span class=\"synConstant\">0.000399<\/span> <span class=\"synError\">***<\/span>\nage             <span class=\"synConstant\">0.011377<\/span>  <span class=\"synConstant\">1.011442<\/span> <span class=\"synConstant\">0.008577<\/span> <span class=\"synConstant\">1.327<\/span> <span class=\"synConstant\">0.184669<\/span>\n<span class=\"synStatement\">---<\/span>\nSignif. codes<span class=\"synSpecial\">:<\/span>  <span class=\"synConstant\">0<\/span> \u2018<span class=\"synError\">***<\/span>\u2019 <span class=\"synConstant\">0.001<\/span> \u2018<span class=\"synStatement\">**<\/span>\u2019 <span class=\"synConstant\">0.01<\/span> \u2018<span class=\"synStatement\">*<\/span>\u2019 <span class=\"synConstant\">0.05<\/span> \u2018.\u2019 <span class=\"synConstant\">0.1<\/span> \u2018 \u2019 <span class=\"synConstant\">1<\/span>\n<span class=\"synIdentifier\">exp<\/span><span class=\"synSpecial\">(<\/span>coef<span class=\"synSpecial\">)<\/span> <span class=\"synIdentifier\">exp<\/span><span class=\"synSpecial\">(<\/span><span class=\"synStatement\">-<\/span>coef<span class=\"synSpecial\">)<\/span> lower <span class=\"synConstant\">.95<\/span> upper <span class=\"synConstant\">.95<\/span>\ninvasionlevel.1     <span class=\"synConstant\">2.764<\/span>     <span class=\"synConstant\">0.3617<\/span>    <span class=\"synConstant\">1.4523<\/span>     <span class=\"synConstant\">5.262<\/span>\ninvasionlevel.2     <span class=\"synConstant\">3.865<\/span>     <span class=\"synConstant\">0.2588<\/span>    <span class=\"synConstant\">1.8287<\/span>     <span class=\"synConstant\">8.167<\/span>\nage                 <span class=\"synConstant\">1.011<\/span>     <span class=\"synConstant\">0.9887<\/span>    <span class=\"synConstant\">0.9946<\/span>     <span class=\"synConstant\">1.029<\/span>\nConcordance<span class=\"synStatement\">=<\/span> <span class=\"synIdentifier\">0.674  <\/span><span class=\"synSpecial\">(<\/span>se <span class=\"synStatement\">=<\/span> <span class=\"synConstant\">0.034<\/span> <span class=\"synSpecial\">)<\/span>\nLikelihood ratio test<span class=\"synStatement\">=<\/span> <span class=\"synConstant\">20.58<\/span>  on <span class=\"synConstant\">3<\/span> df<span class=\"synSpecial\">,<\/span>   p<span class=\"synStatement\">=<\/span><span class=\"synConstant\">1e-04<\/span>\nWald test            <span class=\"synStatement\">=<\/span> <span class=\"synConstant\">18.51<\/span>  on <span class=\"synConstant\">3<\/span> df<span class=\"synSpecial\">,<\/span>   p<span class=\"synStatement\">=<\/span><span class=\"synConstant\">3e-04<\/span>\n<span class=\"synIdentifier\">Score <\/span><span class=\"synSpecial\">(<\/span>logrank<span class=\"synSpecial\">)<\/span> test <span class=\"synStatement\">=<\/span> <span class=\"synConstant\">20.72<\/span>  on <span class=\"synConstant\">3<\/span> df<span class=\"synSpecial\">,<\/span>   p<span class=\"synStatement\">=<\/span><span class=\"synConstant\">1e-04<\/span>\n<span class=\"synStatement\">----------&gt;<\/span> Cause<span class=\"synSpecial\">:<\/span>  <span class=\"synConstant\">2<\/span>\nCall<span class=\"synSpecial\">:<\/span>\nsurvival<span class=\"synSpecial\">::<\/span><span class=\"synIdentifier\">coxph<\/span><span class=\"synSpecial\">(<\/span>formula <span class=\"synStatement\">=<\/span> survival<span class=\"synSpecial\">::<\/span><span class=\"synIdentifier\">Surv<\/span><span class=\"synSpecial\">(<\/span>time<span class=\"synSpecial\">,<\/span> status<span class=\"synSpecial\">)<\/span> <span class=\"synStatement\">~<\/span> invasion <span class=\"synStatement\">+<\/span>\nage<span class=\"synSpecial\">,<\/span> x <span class=\"synStatement\">=<\/span> <span class=\"synConstant\">TRUE<\/span><span class=\"synSpecial\">,<\/span> y <span class=\"synStatement\">=<\/span> <span class=\"synConstant\">TRUE<\/span><span class=\"synSpecial\">)<\/span>\nn<span class=\"synStatement\">=<\/span> <span class=\"synConstant\">205<\/span><span class=\"synSpecial\">,<\/span> number of events<span class=\"synStatement\">=<\/span> <span class=\"synConstant\">14<\/span>\ncoef <span class=\"synIdentifier\">exp<\/span><span class=\"synSpecial\">(<\/span>coef<span class=\"synSpecial\">)<\/span> <span class=\"synIdentifier\">se<\/span><span class=\"synSpecial\">(<\/span>coef<span class=\"synSpecial\">)<\/span>      z <span class=\"synIdentifier\">Pr<\/span><span class=\"synSpecial\">(<\/span><span class=\"synStatement\">&gt;|<\/span>z<span class=\"synStatement\">|<\/span><span class=\"synSpecial\">)<\/span>\ninvasionlevel.1 <span class=\"synStatement\">-<\/span><span class=\"synConstant\">0.90629<\/span>   <span class=\"synConstant\">0.40402<\/span>  <span class=\"synConstant\">0.63869<\/span> <span class=\"synStatement\">-<\/span><span class=\"synConstant\">1.419<\/span>  <span class=\"synConstant\">0.15590<\/span>\ninvasionlevel.2 <span class=\"synStatement\">-<\/span><span class=\"synConstant\">1.36947<\/span>   <span class=\"synConstant\">0.25424<\/span>  <span class=\"synConstant\">1.11620<\/span> <span class=\"synStatement\">-<\/span><span class=\"synConstant\">1.227<\/span>  <span class=\"synConstant\">0.21986<\/span>\nage              <span class=\"synConstant\">0.09509<\/span>   <span class=\"synConstant\">1.09975<\/span>  <span class=\"synConstant\">0.02574<\/span>  <span class=\"synConstant\">3.694<\/span>  <span class=\"synConstant\">0.00022<\/span> <span class=\"synError\">***<\/span>\n<span class=\"synStatement\">---<\/span>\nSignif. codes<span class=\"synSpecial\">:<\/span>  <span class=\"synConstant\">0<\/span> \u2018<span class=\"synError\">***<\/span>\u2019 <span class=\"synConstant\">0.001<\/span> \u2018<span class=\"synStatement\">**<\/span>\u2019 <span class=\"synConstant\">0.01<\/span> \u2018<span class=\"synStatement\">*<\/span>\u2019 <span class=\"synConstant\">0.05<\/span> \u2018.\u2019 <span class=\"synConstant\">0.1<\/span> \u2018 \u2019 <span class=\"synConstant\">1<\/span>\n<span class=\"synIdentifier\">exp<\/span><span class=\"synSpecial\">(<\/span>coef<span class=\"synSpecial\">)<\/span> <span class=\"synIdentifier\">exp<\/span><span class=\"synSpecial\">(<\/span><span class=\"synStatement\">-<\/span>coef<span class=\"synSpecial\">)<\/span> lower <span class=\"synConstant\">.95<\/span> upper <span class=\"synConstant\">.95<\/span>\ninvasionlevel.1    <span class=\"synConstant\">0.4040<\/span>     <span class=\"synConstant\">2.4751<\/span>   <span class=\"synConstant\">0.11555<\/span>     <span class=\"synConstant\">1.413<\/span>\ninvasionlevel.2    <span class=\"synConstant\">0.2542<\/span>     <span class=\"synConstant\">3.9333<\/span>   <span class=\"synConstant\">0.02852<\/span>     <span class=\"synConstant\">2.267<\/span>\nage                <span class=\"synConstant\">1.0998<\/span>     <span class=\"synConstant\">0.9093<\/span>   <span class=\"synConstant\">1.04565<\/span>     <span class=\"synConstant\">1.157<\/span>\nConcordance<span class=\"synStatement\">=<\/span> <span class=\"synIdentifier\">0.827  <\/span><span class=\"synSpecial\">(<\/span>se <span class=\"synStatement\">=<\/span> <span class=\"synConstant\">0.043<\/span> <span class=\"synSpecial\">)<\/span>\nLikelihood ratio test<span class=\"synStatement\">=<\/span> <span class=\"synConstant\">18.66<\/span>  on <span class=\"synConstant\">3<\/span> df<span class=\"synSpecial\">,<\/span>   p<span class=\"synStatement\">=<\/span><span class=\"synConstant\">3e-04<\/span>\nWald test            <span class=\"synStatement\">=<\/span> <span class=\"synConstant\">13.76<\/span>  on <span class=\"synConstant\">3<\/span> df<span class=\"synSpecial\">,<\/span>   p<span class=\"synStatement\">=<\/span><span class=\"synConstant\">0.003<\/span>\n<span class=\"synIdentifier\">Score <\/span><span class=\"synSpecial\">(<\/span>logrank<span class=\"synSpecial\">)<\/span> test <span class=\"synStatement\">=<\/span> <span class=\"synConstant\">14.67<\/span>  on <span class=\"synConstant\">3<\/span> df<span class=\"synSpecial\">,<\/span>   p<span class=\"synStatement\">=<\/span><span class=\"synConstant\">0.002<\/span>\n<\/code><\/pre>\n\n\n\n<p>\u30a4\u30d9\u30f3\u30c8\u7121\u767a\u751f\u751f\u5b58\u5272\u5408 Event-free survival \u3082\u89e3\u6790\u3067\u304d\u308b\u3002<\/p>\n\n\n\n<p>type=&#8221;surv&#8221;\u3068\u8ffd\u52a0\u3059\u308b\u3002<\/p>\n\n\n\n<pre class=\"wp-block-code\"><code>CSC.EFS1 <span class=\"synStatement\">&lt;-<\/span> <span class=\"synIdentifier\">CSC<\/span><span class=\"synSpecial\">(<\/span><span class=\"synIdentifier\">Hist<\/span><span class=\"synSpecial\">(<\/span>time<span class=\"synSpecial\">,<\/span>status<span class=\"synSpecial\">)<\/span><span class=\"synStatement\">~<\/span>invasion<span class=\"synStatement\">+<\/span>age<span class=\"synSpecial\">,<\/span>\ndata<span class=\"synStatement\">=<\/span>Melanoma<span class=\"synSpecial\">,<\/span>surv.type<span class=\"synStatement\">=<\/span><span class=\"synConstant\">\"surv\"<\/span><span class=\"synSpecial\">)<\/span>\n<span class=\"synIdentifier\">print<\/span><span class=\"synSpecial\">(<\/span>CSC.EFS1<span class=\"synSpecial\">)<\/span>\n<\/code><\/pre>\n\n\n\n<p>\u524d\u534a\u306fcause=1\u306e\u7d50\u679c\u3060\u304c\u3001\u5f8c\u534a\u306f Event-Free Survival \u306e\u7d50\u679c\u3067\u3042\u308b\u3002<\/p>\n\n\n\n<p>\u6b63\u78ba\u306b\u306f\u300c\u30a4\u30d9\u30f3\u30c8\u3068\u7af6\u5408\u30ea\u30b9\u30af\u3092\u5408\u308f\u305b\u305f\u3082\u306e\u300d\u3067\u3042\u308b\u3002<\/p>\n\n\n\n<p>\u6d78\u6f64\u30ec\u30d9\u30eb\u3082\u5e74\u9f62\u3082\u9069\u5ea6\u306b\u95a2\u9023\u3057\u3066\u3044\u308b\u3002<\/p>\n\n\n\n<pre class=\"wp-block-code\"><code><span class=\"synStatement\">----------&gt;<\/span> Event<span class=\"synStatement\">-<\/span>free survival<span class=\"synSpecial\">:<\/span>\nCall<span class=\"synSpecial\">:<\/span>\nsurvival<span class=\"synSpecial\">::<\/span><span class=\"synIdentifier\">coxph<\/span><span class=\"synSpecial\">(<\/span>formula <span class=\"synStatement\">=<\/span> survival<span class=\"synSpecial\">::<\/span><span class=\"synIdentifier\">Surv<\/span><span class=\"synSpecial\">(<\/span>time<span class=\"synSpecial\">,<\/span> status<span class=\"synSpecial\">)<\/span> <span class=\"synStatement\">~<\/span> invasion <span class=\"synStatement\">+<\/span>\nage<span class=\"synSpecial\">,<\/span> x <span class=\"synStatement\">=<\/span> <span class=\"synConstant\">TRUE<\/span><span class=\"synSpecial\">,<\/span> y <span class=\"synStatement\">=<\/span> <span class=\"synConstant\">TRUE<\/span><span class=\"synSpecial\">)<\/span>\nn<span class=\"synStatement\">=<\/span> <span class=\"synConstant\">205<\/span><span class=\"synSpecial\">,<\/span> number of events<span class=\"synStatement\">=<\/span> <span class=\"synConstant\">71<\/span>\ncoef <span class=\"synIdentifier\">exp<\/span><span class=\"synSpecial\">(<\/span>coef<span class=\"synSpecial\">)<\/span> <span class=\"synIdentifier\">se<\/span><span class=\"synSpecial\">(<\/span>coef<span class=\"synSpecial\">)<\/span>     z <span class=\"synIdentifier\">Pr<\/span><span class=\"synSpecial\">(<\/span><span class=\"synStatement\">&gt;|<\/span>z<span class=\"synStatement\">|<\/span><span class=\"synSpecial\">)<\/span>\ninvasionlevel.1 <span class=\"synConstant\">0.646208<\/span>  <span class=\"synConstant\">1.908291<\/span> <span class=\"synConstant\">0.281969<\/span> <span class=\"synConstant\">2.292<\/span>  <span class=\"synConstant\">0.02192<\/span> <span class=\"synStatement\">*<\/span>\ninvasionlevel.2 <span class=\"synConstant\">0.912198<\/span>  <span class=\"synConstant\">2.489789<\/span> <span class=\"synConstant\">0.342881<\/span> <span class=\"synConstant\">2.660<\/span>  <span class=\"synConstant\">0.00781<\/span> <span class=\"synStatement\">**<\/span>\nage             <span class=\"synConstant\">0.023160<\/span>  <span class=\"synConstant\">1.023430<\/span> <span class=\"synConstant\">0.008164<\/span> <span class=\"synConstant\">2.837<\/span>  <span class=\"synConstant\">0.00456<\/span> <span class=\"synStatement\">**<\/span>\n<span class=\"synStatement\">---<\/span>\nSignif. codes<span class=\"synSpecial\">:<\/span>  <span class=\"synConstant\">0<\/span> \u2018<span class=\"synError\">***<\/span>\u2019 <span class=\"synConstant\">0.001<\/span> \u2018<span class=\"synStatement\">**<\/span>\u2019 <span class=\"synConstant\">0.01<\/span> \u2018<span class=\"synStatement\">*<\/span>\u2019 <span class=\"synConstant\">0.05<\/span> \u2018.\u2019 <span class=\"synConstant\">0.1<\/span> \u2018 \u2019 <span class=\"synConstant\">1<\/span>\n<span class=\"synIdentifier\">exp<\/span><span class=\"synSpecial\">(<\/span>coef<span class=\"synSpecial\">)<\/span> <span class=\"synIdentifier\">exp<\/span><span class=\"synSpecial\">(<\/span><span class=\"synStatement\">-<\/span>coef<span class=\"synSpecial\">)<\/span> lower <span class=\"synConstant\">.95<\/span> upper <span class=\"synConstant\">.95<\/span>\ninvasionlevel.1     <span class=\"synConstant\">1.908<\/span>     <span class=\"synConstant\">0.5240<\/span>     <span class=\"synConstant\">1.098<\/span>     <span class=\"synConstant\">3.316<\/span>\ninvasionlevel.2     <span class=\"synConstant\">2.490<\/span>     <span class=\"synConstant\">0.4016<\/span>     <span class=\"synConstant\">1.271<\/span>     <span class=\"synConstant\">4.876<\/span>\nage                 <span class=\"synConstant\">1.023<\/span>     <span class=\"synConstant\">0.9771<\/span>     <span class=\"synConstant\">1.007<\/span>     <span class=\"synConstant\">1.040<\/span>\nConcordance<span class=\"synStatement\">=<\/span> <span class=\"synIdentifier\">0.66  <\/span><span class=\"synSpecial\">(<\/span>se <span class=\"synStatement\">=<\/span> <span class=\"synConstant\">0.032<\/span> <span class=\"synSpecial\">)<\/span>\nLikelihood ratio test<span class=\"synStatement\">=<\/span> <span class=\"synConstant\">22.29<\/span>  on <span class=\"synConstant\">3<\/span> df<span class=\"synSpecial\">,<\/span>   p<span class=\"synStatement\">=<\/span><span class=\"synConstant\">6e-05<\/span>\nWald test            <span class=\"synStatement\">=<\/span> <span class=\"synConstant\">21.22<\/span>  on <span class=\"synConstant\">3<\/span> df<span class=\"synSpecial\">,<\/span>   p<span class=\"synStatement\">=<\/span><span class=\"synConstant\">9e-05<\/span>\n<span class=\"synIdentifier\">Score <\/span><span class=\"synSpecial\">(<\/span>logrank<span class=\"synSpecial\">)<\/span> test <span class=\"synStatement\">=<\/span> <span class=\"synConstant\">22.35<\/span>  on <span class=\"synConstant\">3<\/span> df<span class=\"synSpecial\">,<\/span>   p<span class=\"synStatement\">=<\/span><span class=\"synConstant\">6e-05<\/span>\n<\/code><\/pre>\n\n\n\n<h3 class=\"wp-block-heading\" id=\"\u539f\u56e0\u5225-Cox-\u56de\u5e30\u3092\u901a\u5e38\u306e-Cox-\u56de\u5e30\u3067\u518d\u73fe\u3057\u3066\u307f\u308b\">\u539f\u56e0\u5225 Cox \u56de\u5e30\u3092\u901a\u5e38\u306e Cox \u56de\u5e30\u3067\u518d\u73fe\u3057\u3066\u307f\u308b<\/h3>\n\n\n\n<p>\u3061\u306a\u307f\u306b\u539f\u56e0\u5225 Cox \u56de\u5e30\u3092\u901a\u5e38\u306e Cox \u56de\u5e30 coxph() \u3067\u518d\u73fe\u3057\u3066\u307f\u308b\u3068\u3069\u3046\u306a\u308b\u304b\uff1f<\/p>\n\n\n\n<pre class=\"wp-block-code\"><code>coxph1 <span class=\"synStatement\">&lt;-<\/span> <span class=\"synIdentifier\">coxph<\/span><span class=\"synSpecial\">(<\/span><span class=\"synIdentifier\">Surv<\/span><span class=\"synSpecial\">(<\/span>time<span class=\"synSpecial\">,<\/span>status<span class=\"synStatement\">==<\/span><span class=\"synConstant\">1<\/span><span class=\"synSpecial\">)<\/span><span class=\"synStatement\">~<\/span>invasion<span class=\"synStatement\">+<\/span>age<span class=\"synSpecial\">,<\/span>\ndata<span class=\"synStatement\">=<\/span>Melanoma<span class=\"synSpecial\">)<\/span>\n<span class=\"synIdentifier\">summary<\/span><span class=\"synSpecial\">(<\/span>coxph1<span class=\"synSpecial\">)<\/span>\ncoxph2 <span class=\"synStatement\">&lt;-<\/span> <span class=\"synIdentifier\">coxph<\/span><span class=\"synSpecial\">(<\/span><span class=\"synIdentifier\">Surv<\/span><span class=\"synSpecial\">(<\/span>time<span class=\"synSpecial\">,<\/span>status<span class=\"synStatement\">==<\/span><span class=\"synConstant\">2<\/span><span class=\"synSpecial\">)<\/span><span class=\"synStatement\">~<\/span>invasion<span class=\"synStatement\">+<\/span>age<span class=\"synSpecial\">,<\/span>\ndata<span class=\"synStatement\">=<\/span>Melanoma<span class=\"synSpecial\">)<\/span>\n<span class=\"synIdentifier\">summary<\/span><span class=\"synSpecial\">(<\/span>coxph2<span class=\"synSpecial\">)<\/span>\ncoxph3 <span class=\"synStatement\">&lt;-<\/span> <span class=\"synIdentifier\">coxph<\/span><span class=\"synSpecial\">(<\/span><span class=\"synIdentifier\">Surv<\/span><span class=\"synSpecial\">(<\/span>time<span class=\"synSpecial\">,<\/span>status<span class=\"synStatement\">!=<\/span><span class=\"synConstant\">0<\/span><span class=\"synSpecial\">)<\/span><span class=\"synStatement\">~<\/span>invasion<span class=\"synStatement\">+<\/span>age<span class=\"synSpecial\">,<\/span>\ndata<span class=\"synStatement\">=<\/span>Melanoma<span class=\"synSpecial\">)<\/span>\n<span class=\"synIdentifier\">summary<\/span><span class=\"synSpecial\">(<\/span>coxph3<span class=\"synSpecial\">)<\/span>\n<\/code><\/pre>\n\n\n\n<p>coxph1\u304ccause=1\u306e\u7d50\u679c\u3001coxph2\u304ccause=2\u306e\u7d50\u679c\u3001coxph3\u304ccause\u306e1\u30682\u3092\u5408\u308f\u305b\u305f Event-Free Survival \u306e\u7d50\u679c\u3068\u305d\u308c\u305e\u308c\u4e00\u81f4\u3059\u308b\u3002<\/p>\n\n\n\n<pre class=\"wp-block-code\"><code><span class=\"synStatement\">&gt;<\/span> <span class=\"synIdentifier\">summary<\/span><span class=\"synSpecial\">(<\/span>coxph1<span class=\"synSpecial\">)<\/span>\nCall<span class=\"synSpecial\">:<\/span>\n<span class=\"synIdentifier\">coxph<\/span><span class=\"synSpecial\">(<\/span>formula <span class=\"synStatement\">=<\/span> <span class=\"synIdentifier\">Surv<\/span><span class=\"synSpecial\">(<\/span>time<span class=\"synSpecial\">,<\/span> status <span class=\"synStatement\">==<\/span> <span class=\"synConstant\">1<\/span><span class=\"synSpecial\">)<\/span> <span class=\"synStatement\">~<\/span> invasion <span class=\"synStatement\">+<\/span> age<span class=\"synSpecial\">,<\/span> data <span class=\"synStatement\">=<\/span> Melanoma<span class=\"synSpecial\">)<\/span>\nn<span class=\"synStatement\">=<\/span> <span class=\"synConstant\">205<\/span><span class=\"synSpecial\">,<\/span> number of events<span class=\"synStatement\">=<\/span> <span class=\"synConstant\">57<\/span>\ncoef <span class=\"synIdentifier\">exp<\/span><span class=\"synSpecial\">(<\/span>coef<span class=\"synSpecial\">)<\/span> <span class=\"synIdentifier\">se<\/span><span class=\"synSpecial\">(<\/span>coef<span class=\"synSpecial\">)<\/span>     z <span class=\"synIdentifier\">Pr<\/span><span class=\"synSpecial\">(<\/span><span class=\"synStatement\">&gt;|<\/span>z<span class=\"synStatement\">|<\/span><span class=\"synSpecial\">)<\/span>\ninvasionlevel.1 <span class=\"synConstant\">1.016821<\/span>  <span class=\"synConstant\">2.764392<\/span> <span class=\"synConstant\">0.328422<\/span> <span class=\"synConstant\">3.096<\/span> <span class=\"synConstant\">0.001961<\/span> <span class=\"synStatement\">**<\/span>\ninvasionlevel.2 <span class=\"synConstant\">1.351844<\/span>  <span class=\"synConstant\">3.864544<\/span> <span class=\"synConstant\">0.381768<\/span> <span class=\"synConstant\">3.541<\/span> <span class=\"synConstant\">0.000399<\/span> <span class=\"synError\">***<\/span>\nage             <span class=\"synConstant\">0.011377<\/span>  <span class=\"synConstant\">1.011442<\/span> <span class=\"synConstant\">0.008577<\/span> <span class=\"synConstant\">1.327<\/span> <span class=\"synConstant\">0.184669<\/span>\n<span class=\"synStatement\">---<\/span>\nSignif. codes<span class=\"synSpecial\">:<\/span>  <span class=\"synConstant\">0<\/span> \u2018<span class=\"synError\">***<\/span>\u2019 <span class=\"synConstant\">0.001<\/span> \u2018<span class=\"synStatement\">**<\/span>\u2019 <span class=\"synConstant\">0.01<\/span> \u2018<span class=\"synStatement\">*<\/span>\u2019 <span class=\"synConstant\">0.05<\/span> \u2018.\u2019 <span class=\"synConstant\">0.1<\/span> \u2018 \u2019 <span class=\"synConstant\">1<\/span>\n\uff08\u5f8c\u7565\uff09\n<span class=\"synStatement\">&gt;<\/span> <span class=\"synIdentifier\">summary<\/span><span class=\"synSpecial\">(<\/span>coxph2<span class=\"synSpecial\">)<\/span>\nCall<span class=\"synSpecial\">:<\/span>\n<span class=\"synIdentifier\">coxph<\/span><span class=\"synSpecial\">(<\/span>formula <span class=\"synStatement\">=<\/span> <span class=\"synIdentifier\">Surv<\/span><span class=\"synSpecial\">(<\/span>time<span class=\"synSpecial\">,<\/span> status <span class=\"synStatement\">==<\/span> <span class=\"synConstant\">2<\/span><span class=\"synSpecial\">)<\/span> <span class=\"synStatement\">~<\/span> invasion <span class=\"synStatement\">+<\/span> age<span class=\"synSpecial\">,<\/span> data <span class=\"synStatement\">=<\/span> Melanoma<span class=\"synSpecial\">)<\/span>\nn<span class=\"synStatement\">=<\/span> <span class=\"synConstant\">205<\/span><span class=\"synSpecial\">,<\/span> number of events<span class=\"synStatement\">=<\/span> <span class=\"synConstant\">14<\/span>\ncoef <span class=\"synIdentifier\">exp<\/span><span class=\"synSpecial\">(<\/span>coef<span class=\"synSpecial\">)<\/span> <span class=\"synIdentifier\">se<\/span><span class=\"synSpecial\">(<\/span>coef<span class=\"synSpecial\">)<\/span>      z <span class=\"synIdentifier\">Pr<\/span><span class=\"synSpecial\">(<\/span><span class=\"synStatement\">&gt;|<\/span>z<span class=\"synStatement\">|<\/span><span class=\"synSpecial\">)<\/span>\ninvasionlevel.1 <span class=\"synStatement\">-<\/span><span class=\"synConstant\">0.90629<\/span>   <span class=\"synConstant\">0.40402<\/span>  <span class=\"synConstant\">0.63869<\/span> <span class=\"synStatement\">-<\/span><span class=\"synConstant\">1.419<\/span>  <span class=\"synConstant\">0.15590<\/span>\ninvasionlevel.2 <span class=\"synStatement\">-<\/span><span class=\"synConstant\">1.36947<\/span>   <span class=\"synConstant\">0.25424<\/span>  <span class=\"synConstant\">1.11620<\/span> <span class=\"synStatement\">-<\/span><span class=\"synConstant\">1.227<\/span>  <span class=\"synConstant\">0.21986<\/span>\nage              <span class=\"synConstant\">0.09509<\/span>   <span class=\"synConstant\">1.09975<\/span>  <span class=\"synConstant\">0.02574<\/span>  <span class=\"synConstant\">3.694<\/span>  <span class=\"synConstant\">0.00022<\/span> <span class=\"synError\">***<\/span>\n<span class=\"synStatement\">---<\/span>\nSignif. codes<span class=\"synSpecial\">:<\/span>  <span class=\"synConstant\">0<\/span> \u2018<span class=\"synError\">***<\/span>\u2019 <span class=\"synConstant\">0.001<\/span> \u2018<span class=\"synStatement\">**<\/span>\u2019 <span class=\"synConstant\">0.01<\/span> \u2018<span class=\"synStatement\">*<\/span>\u2019 <span class=\"synConstant\">0.05<\/span> \u2018.\u2019 <span class=\"synConstant\">0.1<\/span> \u2018 \u2019 <span class=\"synConstant\">1<\/span>\n\uff08\u5f8c\u7565\uff09\n<span class=\"synStatement\">&gt;<\/span> <span class=\"synIdentifier\">summary<\/span><span class=\"synSpecial\">(<\/span>coxph3<span class=\"synSpecial\">)<\/span>\nCall<span class=\"synSpecial\">:<\/span>\n<span class=\"synIdentifier\">coxph<\/span><span class=\"synSpecial\">(<\/span>formula <span class=\"synStatement\">=<\/span> <span class=\"synIdentifier\">Surv<\/span><span class=\"synSpecial\">(<\/span>time<span class=\"synSpecial\">,<\/span> status <span class=\"synStatement\">!=<\/span> <span class=\"synConstant\">0<\/span><span class=\"synSpecial\">)<\/span> <span class=\"synStatement\">~<\/span> invasion <span class=\"synStatement\">+<\/span> age<span class=\"synSpecial\">,<\/span> data <span class=\"synStatement\">=<\/span> Melanoma<span class=\"synSpecial\">)<\/span>\nn<span class=\"synStatement\">=<\/span> <span class=\"synConstant\">205<\/span><span class=\"synSpecial\">,<\/span> number of events<span class=\"synStatement\">=<\/span> <span class=\"synConstant\">71<\/span>\ncoef <span class=\"synIdentifier\">exp<\/span><span class=\"synSpecial\">(<\/span>coef<span class=\"synSpecial\">)<\/span> <span class=\"synIdentifier\">se<\/span><span class=\"synSpecial\">(<\/span>coef<span class=\"synSpecial\">)<\/span>     z <span class=\"synIdentifier\">Pr<\/span><span class=\"synSpecial\">(<\/span><span class=\"synStatement\">&gt;|<\/span>z<span class=\"synStatement\">|<\/span><span class=\"synSpecial\">)<\/span>\ninvasionlevel.1 <span class=\"synConstant\">0.646208<\/span>  <span class=\"synConstant\">1.908291<\/span> <span class=\"synConstant\">0.281969<\/span> <span class=\"synConstant\">2.292<\/span>  <span class=\"synConstant\">0.02192<\/span> <span class=\"synStatement\">*<\/span>\ninvasionlevel.2 <span class=\"synConstant\">0.912198<\/span>  <span class=\"synConstant\">2.489789<\/span> <span class=\"synConstant\">0.342881<\/span> <span class=\"synConstant\">2.660<\/span>  <span class=\"synConstant\">0.00781<\/span> <span class=\"synStatement\">**<\/span>\nage             <span class=\"synConstant\">0.023160<\/span>  <span class=\"synConstant\">1.023430<\/span> <span class=\"synConstant\">0.008164<\/span> <span class=\"synConstant\">2.837<\/span>  <span class=\"synConstant\">0.00456<\/span> <span class=\"synStatement\">**<\/span>\n<span class=\"synStatement\">---<\/span>\nSignif. codes<span class=\"synSpecial\">:<\/span>  <span class=\"synConstant\">0<\/span> \u2018<span class=\"synError\">***<\/span>\u2019 <span class=\"synConstant\">0.001<\/span> \u2018<span class=\"synStatement\">**<\/span>\u2019 <span class=\"synConstant\">0.01<\/span> \u2018<span class=\"synStatement\">*<\/span>\u2019 <span class=\"synConstant\">0.05<\/span> \u2018.\u2019 <span class=\"synConstant\">0.1<\/span> \u2018 \u2019 <span class=\"synConstant\">1<\/span>\n\uff08\u5f8c\u7565\uff09\n<\/code><\/pre>\n\n\n\n<h2 class=\"wp-block-heading\" id=\"\u307e\u3068\u3081\">\u307e\u3068\u3081<\/h2>\n\n\n\n<p>\u7af6\u5408\u30ea\u30b9\u30af\u304c\u3042\u308b\u5834\u5408\u306e\u751f\u5b58\u6642\u9593\u5206\u6790\u3067\u3001\u30e2\u30c7\u30eb\u3092\u4f7f\u3063\u305f\u5171\u5909\u91cf\u8abf\u6574\u3092\u884c\u3044\u305f\u3044\u5834\u5408\u306e\u65b9\u6cd5\u3092\u7d39\u4ecb\u3057\u305f\u3002<\/p>\n\n\n\n<p>\u7af6\u5408\u30ea\u30b9\u30af\u56de\u5e30\u306e\u5206\u6790\u65b9\u6cd5\u306f\u56db\u3064\u3042\u308b\u304c\u3001\u65b9\u6cd5\u8ad6\u306e\u9069\u5207\u6027\u3068\u7d50\u679c\u306e\u89e3\u91c8\u306e\u308f\u304b\u308a\u3084\u3059\u3055\u3092\u8003\u616e\u3059\u308b\u3068\u7d76\u5bfe\u30ea\u30b9\u30af\u56de\u5e30\u304c\u304a\u3059\u3059\u3081\u3060\u3002<\/p>\n\n\n\n<p>R\u3067\u3042\u308c\u3070\u3001riskRegression, prodlim \u306e\u4e8c\u3064\u306e\u30d1\u30c3\u30b1\u30fc\u30b8\u3092\u30a4\u30f3\u30b9\u30c8\u30fc\u30eb\u3059\u308c\u3070\u5b9f\u73fe\u53ef\u80fd\u3067\u3042\u308b\u3002<\/p>\n","protected":false},"excerpt":{"rendered":"<p>\u7af6\u5408\u30ea\u30b9\u30af\u56de\u5e30\u3068\u306f\u3001\u5171\u5909\u91cf\u8abf\u6574\u3092\u3057\u305f\u7af6\u5408\u30ea\u30b9\u30af\u5206\u6790\u306e\u65b9\u6cd5\u3002<\/p>\n","protected":false},"author":2,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"swell_btn_cv_data":"","_jetpack_memberships_contains_paid_content":false,"footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":false,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2}},"categories":[5,52],"tags":[],"class_list":["post-430","post","type-post","status-publish","format-standard","hentry","category-r","category-52"],"jetpack_publicize_connections":[],"jetpack_featured_media_url":"","jetpack_sharing_enabled":true,"_links":{"self":[{"href":"https:\/\/best-biostatistics.com\/toukei-er\/wp-json\/wp\/v2\/posts\/430","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/best-biostatistics.com\/toukei-er\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/best-biostatistics.com\/toukei-er\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/best-biostatistics.com\/toukei-er\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/best-biostatistics.com\/toukei-er\/wp-json\/wp\/v2\/comments?post=430"}],"version-history":[{"count":2,"href":"https:\/\/best-biostatistics.com\/toukei-er\/wp-json\/wp\/v2\/posts\/430\/revisions"}],"predecessor-version":[{"id":2467,"href":"https:\/\/best-biostatistics.com\/toukei-er\/wp-json\/wp\/v2\/posts\/430\/revisions\/2467"}],"wp:attachment":[{"href":"https:\/\/best-biostatistics.com\/toukei-er\/wp-json\/wp\/v2\/media?parent=430"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/best-biostatistics.com\/toukei-er\/wp-json\/wp\/v2\/categories?post=430"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/best-biostatistics.com\/toukei-er\/wp-json\/wp\/v2\/tags?post=430"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}